Browse of TCMCG057C53529 protein

CDS

Accession Number	TCMCG057C53529
gbkey	CDS
Protein Id	XP_018459371.1
Location	complement(join(62745..62996,63090..63205,63281..63417,63499..63662,63763..63843,63965..64144,64226..64415,64501..64664))
Gene	LOC108830267
GeneID	108830267
Organism	Raphanus sativus

Protein

Length	427aa
Molecule type	protein
Topology	linear
Data_file_division	PLN
dblink	BioProject:PRJNA344915
db_source	XM_018603869.1
Definition	PREDICTED: hydroxymethylglutaryl-CoA lyase, mitochondrial-like [Raphanus sativus]

EGGNOG-MAPPER Annotation

COG_category	CE
Description	HMGL-like
KEGG_TC	-
KEGG_Module	M00036        [VIEW IN KEGG] M00088        [VIEW IN KEGG]
KEGG_Reaction	R01360        [VIEW IN KEGG] R08090        [VIEW IN KEGG]
KEGG_rclass	RC00502        [VIEW IN KEGG] RC00503        [VIEW IN KEGG] RC01118        [VIEW IN KEGG] RC01946        [VIEW IN KEGG]
BRITE	ko00000        [VIEW IN KEGG] ko00001        [VIEW IN KEGG] ko00002        [VIEW IN KEGG] ko01000        [VIEW IN KEGG]
KEGG_ko	ko:K01640        [VIEW IN KEGG]
EC	4.1.3.4        [VIEW IN KEGG]        [VIEW IN INGREDIENT]
KEGG_Pathway	ko00072        [VIEW IN KEGG] ko00280        [VIEW IN KEGG] ko00281        [VIEW IN KEGG] ko00650        [VIEW IN KEGG] ko01100        [VIEW IN KEGG] ko04146        [VIEW IN KEGG] map00072        [VIEW IN KEGG] map00280        [VIEW IN KEGG] map00281        [VIEW IN KEGG] map00650        [VIEW IN KEGG] map01100        [VIEW IN KEGG] map04146        [VIEW IN KEGG]
GOs	GO:0003674        [VIEW IN EMBL-EBI] GO:0003824        [VIEW IN EMBL-EBI] GO:0004419        [VIEW IN EMBL-EBI] GO:0005488        [VIEW IN EMBL-EBI] GO:0005575        [VIEW IN EMBL-EBI] GO:0005622        [VIEW IN EMBL-EBI] GO:0005623        [VIEW IN EMBL-EBI] GO:0005737        [VIEW IN EMBL-EBI] GO:0005739        [VIEW IN EMBL-EBI] GO:0016829        [VIEW IN EMBL-EBI] GO:0016830        [VIEW IN EMBL-EBI] GO:0016833        [VIEW IN EMBL-EBI] GO:0043167        [VIEW IN EMBL-EBI] GO:0043169        [VIEW IN EMBL-EBI] GO:0043226        [VIEW IN EMBL-EBI] GO:0043227        [VIEW IN EMBL-EBI] GO:0043229        [VIEW IN EMBL-EBI] GO:0043231        [VIEW IN EMBL-EBI] GO:0044424        [VIEW IN EMBL-EBI] GO:0044444        [VIEW IN EMBL-EBI] GO:0044464        [VIEW IN EMBL-EBI] GO:0046872        [VIEW IN EMBL-EBI]

Sequence

CDS:   ATGTCGAGTTTGGAGGAGCCACTAGCTTTTGACAAGTTGCCAAGTATGAACACCATCGACAGGATCCAGAGGTTTTCATCCGGTGCTTGTCGCCCCAGGGATGATGTCGGCATGGGACACCGTTGGATCCAGGGAAGAGATTGCACCACCTCTAACTCTTGCAATGATGATGATGAGAGCTTTGGTAAAGAGTCGTTTCCGTGGAAAAGGCATACTCGGAAAGTGTCTGAAGGAGAAATTCTGCTTCGGAGTACTTCTTTCTCAGCAAGGAACTCCTCCAAAAGTTTTCAGGAGCATAACAACTATCACACCTTTAACAATGAGAATGGAGGCATCTCACATTCAATTAATAAACTCGTTAGAGGGGTACCGAAGTTTGTGAAGATTGTTGAAGTTGGTCCAAGGGATGGTCTGCAGAACGAGAAAAATATTGTACCCACGTCTGTAAAGGTGGAACTTATTCAGAGATTAGTTTCTGCTGGATTGCCCGTTGTCGAGGCTACAAGCTTTGTATCACCTAAATGGGTTCCTCAGCTTGCAGATGCAAAGGATGTAATGGACAGAGTAAATGCTCTAGATGGGGCTCGATTGCCGGTTCTGACTCCGAATCTAAAAGGCTTTGAAGCGGCTGTATCTGCAGGTGCTAAGGAAGTTGCAATCTTTGCATCGGCTTCTGAGTCATTCTCCTTGTCAAATATCAACTGTACCATTGAAGAGAGTCTCTTGAGATATCGTGCTGTTGTCACTGCTGCAAAGGAGCATTCCATTCCTGTCCGTGGGTATGTATCGTGCGTTGTCGGGTGTCCAGTAGAGGAGGCGGTTCCACCCTCAAAAGTGGCGCATGTTGTAAAAGAGCTCTATGACATGGGCTGCTTTGAGATTTCTCTTGGTGATACAATAGGAATCGGCACTCCCGGTACTGTGGTTCCGATGCTTGAAGCTGTGATGGCAGTTGTGCCACCAGAAAAGCTGGCTGTTCATTTCCACGATACCTATGGGCAAGCTCTTGCAAACATATTGGTGTCTCTCCAAATGGGAATAAACATAGTAGACTCTTCAGTCGCTGGATTAGGCGGCTGCCCATATGCAAAAGGAGCTTCAGGAAACGTAGCTACAGAAGATGTGGTTTACATGTTGAACGGTTTAGGCGTTCAAACCAATGTTGATTTGGGAAAGCTTATAGCTGCTGGAGATTTCATCAGCAAGCATCTTGGCCGTCCAAACGGTTCCAAGGCTGCCGTTGCCCTCAACCGTCGGGTCACAGCTGATGCCTCGAAGATTTGA

Protein:   MSSLEEPLAFDKLPSMNTIDRIQRFSSGACRPRDDVGMGHRWIQGRDCTTSNSCNDDDESFGKESFPWKRHTRKVSEGEILLRSTSFSARNSSKSFQEHNNYHTFNNENGGISHSINKLVRGVPKFVKIVEVGPRDGLQNEKNIVPTSVKVELIQRLVSAGLPVVEATSFVSPKWVPQLADAKDVMDRVNALDGARLPVLTPNLKGFEAAVSAGAKEVAIFASASESFSLSNINCTIEESLLRYRAVVTAAKEHSIPVRGYVSCVVGCPVEEAVPPSKVAHVVKELYDMGCFEISLGDTIGIGTPGTVVPMLEAVMAVVPPEKLAVHFHDTYGQALANILVSLQMGINIVDSSVAGLGGCPYAKGASGNVATEDVVYMLNGLGVQTNVDLGKLIAAGDFISKHLGRPNGSKAAVALNRRVTADASKI